1998–99 FC Desna Chernihiv season

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For the 1998–99 season, FC Desna Chernihiv competed in the Ukrainian First League. The club was led by president Volodymyr Khomenko and manager Yukhym Shkolnykov, with home games at Chernihiv Stadium. Desna finished 19th in the league and were knocked out in the Ukrainian Cup at the Round of 64. The top scorer was Vladimir Martynov, with 5 goals in the league and 5 in all competitions.